[1] Rong-Rong Chen, Li Wang, Xue-Xue Ji, Cai-Yun Xie*, Yue-Qin Tang. Identification of key transcription factors, including DAL80 and CRZ1, involved in heat and ethanol tolerance in Saccharomyces cerevisiae. Biotechnol Biofuels Bioprod. 2025; 18, 50.
[2] Xin-Yu Xiao, Xin-Yu Wang, Ya-Jing Wu, Ying Cheng, Quan Zhang, Cai-Yun Xie*, Yue-Qin Tang*. Improving inhibitor tolerance of xylitol-producing Saccharomyces cerevisiae by overexpressing key target genes mined through comparative transcriptomes. Biotechnol Biofuels Bioprod. 2026; 19, 15.
[3] Xiu-Lin Chu, Xiang-Yu Peng, Zhao-Yong Sun*, Cai-Yun Xie*, Yue-Qin Tang. Converting kitchen waste into value-added fertilizer using thermophilic semi-continuous composting-biofiltration two-stage process with minimized NH3 emission. Bioresour Technol. 2024; 406:130955.
[4] Li Wang, Bo Li, Ran-Ran Su, Shi-Peng Wang, Zi-Yuan Xia, Cai-Yun Xie*, Yue-Qin Tang*. Screening novel genes by a comprehensive strategy to construct multiple stress-tolerant industrial Saccharomyces cerevisiae with prominent bioethanol production. Biotechnol Biofuels Bioprod. 2022; 15(1):11.
[5] Yu-Ping Xia, Xin-Yu Wang, Bai-Xue Yang, Cai-Yun Xie*, Yue-Qin Tang. Response mechanisms of xylitol-producing Saccharomyces cerevisiae strains to acetic acid and furfural and the role of SPI1, CTT1, and CLB1 in tolerance. Microb Cell Fact. 2026; 25, 114.
[6] Mao-Ting Li, Li Wang, Cai-Yun Xie*, Min Gou, Yue-Qin Tang. Transcriptomics-guided identification of engineering targets for improving salt tolerance in Saccharomyces cerevisiae. Microb Cell Fact. 2026; 25, 139.
[7] Xue-Xue Ji, Quan Zhang, Bai-Xue Yang, Qing-Ran Song, Zhao-Yong Sun, Cai-Yun Xie*, Yue-Qin Tang. Response mechanism of ethanol-tolerant Saccharomyces cerevisiae strain ES-42 to increased ethanol during continuous ethanol fermentation. Microb Cell Fact. 2025; 24, 33.
[8] Cai-Yun Xie, Ran-Ran Su, Bo Wu, Zhao-Yong Sun, Yue-Qin Tang*. Response mechanisms of different Saccharomyces cerevisiae strains to succinic acid. BMC Microbiol. 2024; 24(1):158.
[9] Xue-Xue Ji, Bo Li, Rong-Rong Chen, Zi-Yuan Xia, Cai-Yun Xie*, Yue-Qin Tang*. Impact of complex inhibitors in straw hydrolysates on xylose-fermenting Saccharomyces cerevisiae and inhibitor-tolerant strain construction. Fungal Biol. 2026; 130(1), 101709.
[10] Xin-Yu Xiao, Bo Li, Zi-Yuan Xia, Quan Zhang*, Cai-Yun Xie*, Yue-Qin Tang. Regulatory mechanism of Haa1p and Hap4p in Saccharomyces cerevisiae to mixed acetic acid and formic acid when fermenting mixed glucose and xylose. Microb Cell Fact. 2025; 24, 156.
[11] EnZhe Yang, Hong Wang, Lu Wang, ZiYuan Xia, CaiYun Xie*, Min Gou*, YueQin Tang, Multi-omics analysis unveils mechanisms underlying ARTP mutagenesis-induced enhancement of rhamnolipid production in Pseudomonas aeruginosa, Food Biosci. 2025; 68, 106597.
[12] Yajing Wu, Bo Li, Bu Miao*, Caiyun Xie*, Yue-Qin Tang. Saccharomyces cerevisiae employs complex regulation strategies to tolerate low pH stress during ethanol production. Microb Cell Fact. 2022; 21(1):247.
[13] Bo Li, Li Wang, Jin-Yu Xie, Zi-Yuan Xia, Cai-Yun Xie*, Yue-Qin Tang*. Regulatory mechanism of Haa1p and Tye7p in Saccharomyces cerevisiae when fermenting mixed glucose and xylose with or without inhibitors. Microb Cell Fact. 2022; 21(1):105.
[14] Furong Zuo, Yajing Wu, Yanqiu Sun, Caiyun Xie*, Yueqin Tang. Mechanism of enhanced salt tolerance in Saccharomyces cerevisiae by CRZ1 overexpression. Sci Rep. 2024; 14:22875.
[15] Lu Wang, Xinmin Song, Chuanfu Ji, Maozhang Tian, Caiyun Xie*, Min Gou*, Wenfeng Song, Yueqin Tang. Transcriptomic response of Xanthomonas campestris during xanthan gum production to glutamate concentration. Sci Rep. 2026; 16, 13377.
[16] Cai-Yun Xie, Bai-Xue Yang, Qing-Ran Song, Zi-Yuan Xia, Min Gou*, Yue-Qin Tang*. Different transcriptional responses of haploid and diploid S. cerevisiae strains to changes in cofactor preference of XR. Microb Cell Fact. 2020; 19(1):211.
[17] Cai-Yun Xie, Bai-Xue Yang, Ya-Jing Wu, Zi-Yuan Xia, Min Gou, Zhao-Yong Sun, Yue-Qin Tang*. Construction of industrial xylose-fermenting Saccharomyces cerevisiae strains through combined approaches. Process Biochem. 2020; 96:80-89.